.\" DO NOT MODIFY THIS FILE!  It was generated by help2man 1.47.13.
.TH PARTIT2BED.PL "1" "March 2020" "partit2bed.pl 1.5.5" "User Commands"
.SH NAME
partit2bed.pl \- converts the output of the ChIP-Seq partitioning program to BED format
.SH DESCRIPTION
.IP
partit2bed.pl [options] <ChIP\-Part out file>
.IP
where options are:
.TP
\fB\-h\fR|\-\-help
Show this stuff
.TP
\fB\-\-db\fR <path>
Use <path> to locate Chrom Id Storable File 'chro_idx.nstorage'
.TP
\fB\-t\fR|\-\-track <track>
BED track name [def: Test\-BED]
.TP
\fB\-d\fR|\-\-desc <desc>
Description field of the BED header line [def: ChIP\-Seq]
.TP
\fB\-n\fR <int>
Chromosome number (BED declaration lines) [def: 0 \- all chromosomes]
.TP
\fB\-b\fR <int>
Chromosome start [def: \fB\-1\fR \- entire chrom region]
.TP
\fB\-e\fR <int>
Chromosome end [def: \fB\-1\fR \- entire chrom region]
.IP
The program converts the output of the ChIP\-Seq partitioning program to BED format.
.SH AUTHOR
 This manpage was written by Andreas Tille for the Debian distribution and
 can be used for any other usage of the program.