.\" DO NOT MODIFY THIS FILE!  It was generated by help2man 1.47.13.
.TH FPS2SGA.PL "1" "March 2020" "fps2sga.pl 1.5.5" "User Commands"
.SH NAME
fps2sga.pl \- convert fps to sga
.SH DESCRIPTION
.IP
fps2sga.pl [options] <FPS file>
.IP
where options are:
.TP
\fB\-h\fR|\-\-help
Show this stuff
.TP
\fB\-f\fR|\-\-feature <feature>
Set Feature name <feature>
.TP
\fB\-s\fR|\-\-species <species>
Assembly <species> (i.e hg18)
.TP
\fB\-x\fR
Generate an extended SGA file with the
6th field equal to the FPS 'description' field
.TP
\fB\-\-ignore0flag\fR
Ignore 0 flag at position 29 of the FP line,
so keep orientation the same as original
.PP
        
.SH AUTHOR
 This manpage was written by Andreas Tille for the Debian distribution and
 can be used for any other usage of the program.