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FASTAQ-DEINTERLEAVE(1) User Commands FASTAQ-DEINTERLEAVE(1)

NAME

fastaq_deinterleave - Splits interleaved paired file into two separate files

DESCRIPTION

usage: fastaq_deinterleave [options] <infile> <out_fwd> <out_rev>

Deinterleaves sequence file, so that reads are written alternately between two output files

positional arguments:

Name of fasta/q file to be deinterleaved
Name of output fasta/q file of forwards reads
Name of output fasta/q file of reverse reads

optional arguments:

show this help message and exit
Use this to write output as fasta (default is same as input)
February 2017 fastaq 3.15.0