| mia-3disosurface-from-stack(1) | General Commands Manual | mia-3disosurface-from-stack(1) |
NAME¶
mia-3disosurface-from-stack - Extract an ist-surface froma a 3D image.
SYNOPSIS¶
mia-3disosurface-from-stack -i <in-image> -o <out-mesh> [options]
DESCRIPTION¶
mia-3disosurface-from-stack This program is used to extract an iso-surface from the input gray scale image given as slices.
OPTIONS¶
File-IO¶
- -i --in-image=(input, required); string
- input image filename pattern
- -o --out-mesh=(required, output); string
- output mesh
Help & Info¶
- -V --verbose=warning
- verbosity of output, print messages of given level and higher priorities. Supported priorities starting at lowest level are:
- --copyright
- print copyright information
- -h --help
- print this help
- -? --usage
- print a short help
- --version
- print the version number and exit
Image options¶
- -s --iso-value=128
- iso-value of iso surface to be extracted
Mesh options¶
- -f --max-faces=-1
- maximum number of Faces,
- -e --max-edges=-1
- maximum number of Edges
- -c --max-cost=0.1
- maximum cost for edge collaps
- -r --ratio=4
- ratio of faces(edges) to target number, at which the optimization changes from edge-length to volume-optimized
- -w --reverse-winding
- reverse the winding of the triangles in order to make normals point away from the high intensity area
Processing¶
- --threads=-1
- Maxiumum number of threads to use for processing,This number should be lower or equal to the number of logical processor cores in the machine. (-1: automatic estimation).
EXAMPLE¶
Extract the surface from an image set with numbers imageXXXX.png that corresponds to the value 30 and stop optimizing when the mesh consists of less than 100000 triangles.
mia-3disosurface-from-stack -i image0000.png -o mesh.vmesh -s 30 -f 100000
AUTHOR(s)¶
Gert Wollny
COPYRIGHT¶
This software is Copyright (c) 1999‐2015 Leipzig, Germany and Madrid, Spain. It comes with ABSOLUTELY NO WARRANTY and you may redistribute it under the terms of the GNU GENERAL PUBLIC LICENSE Version 3 (or later). For more information run the program with the option '--copyright'.
| v2.4.7 | USER COMMANDS |