BP_GENERATE_HISTOGRAM(1p) | User Contributed Perl Documentation | BP_GENERATE_HISTOGRAM(1p) |
NAME¶
bp_generate_histogram.pl -- Generate a histogram of Bio::DB::GFF features
SYNOPSIS¶
bp_generate_histogram.pl -d gadfly variation gene:curated
DESCRIPTION¶
Use this utility to generate feature density histograms from Bio::DB::GFF databases. The result is a GFF data file that is suitable for loading with load_gff.pl.
OPTIONS¶
The following options are recognized:
Option Description ------ ----------- --dsn <dsn> Data source (default dbi:mysql:test) --adaptor <adaptor> Schema adaptor (default dbi::mysqlopt) --user <user> Username for mysql authentication --pass <password> Password for mysql authentication --aggregator <list> Comma-separated list of aggregators
BUGS¶
Please report them.
SEE ALSO¶
Bio::DB::GFF
AUTHOR¶
Lincoln Stein <lstein@cshl.org>
Copyright (c) 2001 Cold Spring Harbor Laboratory
This library is free software; you can redistribute it and/or modify it under the same terms as Perl itself. See DISCLAIMER.txt for disclaimers of warranty.
2018-10-27 | perl v5.26.2 |