table of contents
KMOS_ILLUMINATION(7) | kmos recipes | KMOS_ILLUMINATION(7) |
NAME¶
kmos_illumination - Create a frame to correct spatial non-uniformity of flatfield
SYNOPSIS¶
esorex kmos_illumination [OPTIONS] FILE.sof
DESCRIPTION¶
This recipe creates the spatial non-uniformity calibration frame needed for all three detectors. It must be called after the kmo_wave_cal-recipe, which generates the spectral calibration frame needed in this recipe. As input at least a sky or flat, a master dark, a master flat and the spatial and spectral calibration frames are required.
The created product, the illumination correction, can be used as input for kmo_std_star and kmo_sci_red.
Input files:
DO CATG Type Explanation Required #Frames
-------- ----- ----------- -------- -------
FLAT_SKY F2D Sky exposures Y 1-n
(at least 3 frames recommended) or FLAT_ON F2D Flat exposures Y 1-n
(at least 3 frames recommended)
MASTER_DARK F2D Master dark Y 1
MASTER_FLAT F2D Master flat Y 1
XCAL F2D x calibration frame Y 1
YCAL F2D y calibration frame Y 1
LCAL F2D Wavelength calib. frame Y 1
WAVE_BAND F2L Table with start-/end-wavelengths Y 1
FLAT_EDGE F2L Table with fitted slitlet edges N 0,1
Output files:
DO CATG Type Explanation
-------- ----- -----------
ILLUM_CORR F2I Illumination calibration frame
If FLAT_EDGE is provided:
SKYFLAT_EDGE F2L Frame containing parameters of fitted
slitlets of all IFUs of all detectors
OPTIONS¶
- --used_flat_type <str>
- Type (sky/lamp) of input to use: (only if 2 types in input) (str; default: ´sky´). The full name of this option for the EsoRex configuration file is kmos.kmos_illumination.used_flat_type [default = sky].
- --imethod <str>
- Method to use for interpolation: ["NN" (nearest neighbour), "lwNN" (linear weighted nearest neighbor), "swNN" (square weighted nearest neighbor), "MS" (Modified Shepard´s method), "CS" (Cubic spline)] (str; default: ´CS´). The full name of this option for the EsoRex configuration file is kmos.kmos_illumination.imethod [default = CS].
- --neighborhoodRange <float>
- Range (pixels) to search for neighbors (float; default: 1.001). The full name of this option for the EsoRex configuration file is kmos.kmos_illumination.neighborhoodRange [default = 1.001].
- --range <str>
- The spectral ranges to combine when collapsing the reconstructed cubes. e.g. "x1_start,x1_end;x2_start,x2_end" (microns) (str; default: ´´). The full name of this option for the EsoRex configuration file is kmos.kmos_illumination.range [default = ].
- --flux <bool>
- TRUE: Apply flux conservation. FALSE: otherwise (bool; default: False). The full name of this option for the EsoRex configuration file is kmos.kmos_illumination.flux [default = False].
- --add-all <bool>
- FALSE: omit 1st FLAT_SKY frame (acquisition), TRUE: don´t perform any checks, add them all (bool; default: False). The full name of this option for the EsoRex configuration file is kmos.kmos_illumination.add-all [default = False].
- --pix_scale <float>
- Change the pixel scale [arcsec]. Default of 0.2" results into cubes of 14x14pix, a scale of 0.1" results into cubes of 28x28pix, etc. (float; default: 0.2). The full name of this option for the EsoRex configuration file is kmos.kmos_illumination.pix_scale [default = 0.2].
- --suppress_extension <bool>
- Suppress filename extension. (TRUE (apply) or FALSE (don´t apply) (bool; default: False). The full name of this option for the EsoRex configuration file is kmos.kmos_illumination.suppress_extension [default = False].
- --b_samples <int>
- The number of samples in wavelength for the reconstructed cube (int; default: 2048). The full name of this option for the EsoRex configuration file is kmos.kmos_illumination.b_samples [default = 2048].
- --cmethod <str>
- Apply "average", "median", "sum", "min_max." or "ksigma". (str; default: ´ksigma´). The full name of this option for the EsoRex configuration file is kmos.kmos_illumination.cmethod [default = ksigma].
- --cpos_rej <float>
- The positive rejection threshold for kappa-sigma-clipping (sigma). (float; default: 3.0). The full name of this option for the EsoRex configuration file is kmos.kmos_illumination.cpos_rej [default = 3.0].
- --cneg_rej <float>
- The negative rejection threshold for kappa-sigma-clipping (sigma). (float; default: 3.0). The full name of this option for the EsoRex configuration file is kmos.kmos_illumination.cneg_rej [default = 3.0].
- --citer <int>
- The number of iterations for kappa-sigma-clipping. (int; default: 3). The full name of this option for the EsoRex configuration file is kmos.kmos_illumination.citer [default = 3].
- --cmax <int>
- The number of maximum pixel values to clip with min/max-clipping. (int; default: 1). The full name of this option for the EsoRex configuration file is kmos.kmos_illumination.cmax [default = 1].
- --cmin <int>
- The number of minimum pixel values to clip with min/max-clipping. (int; default: 1). The full name of this option for the EsoRex configuration file is kmos.kmos_illumination.cmin [default = 1].
- --det <int>
- Only reduce the specified detector (int; default: 0). The full name of this option for the EsoRex configuration file is kmos.kmos_illumination.detector [default = 0].
- --angle <float>
- Only reduce the specified angle (float; default: 370.0). The full name of this option for the EsoRex configuration file is kmos.kmos_illumination.angle [default = 370.0].
Note that it is possible to create a configuration file containing these options, along with suitable default values. Please refer to the details provided by the 'esorex --help' command.
SEE ALSO¶
The full documentation for the kmos pipeline can be downloaded as a PDF file using the following URL:
An overview over the existing ESO pipelines can be found on the web page https://www.eso.org/sci/software/pipelines/.
Basic documentation about the EsoRex program can be found at the esorex (1) man page.
It is possible to call the pipelines from python using the python-cpl package. See https://packages.python.org/python-cpl/index.html for further information.
The other recipes of the kmos pipeline are kmo_arithmetic(7), kmo_copy(7), kmo_fit_profile(7), kmo_fits_strip(7), kmo_make_image(7), kmo_noise_map(7), kmo_rotate(7), kmo_shift(7), kmo_sky_mask(7), kmo_stats(7), kmos_combine(7), kmos_dark(7), kmos_extract_spec(7), kmos_flat(7), kmos_gen_reflines(7), kmos_gen_telluric(7), kmos_reconstruct(7), kmos_sci_red(7), kmos_sky_tweak(7), kmos_std_star(7), kmos_test(7), kmos_wave_cal(7)
VERSION¶
kmos_illumination 2.1.0
AUTHOR¶
Alex Agudo Berbel, Yves Jung <usd-help@eso.org>
BUG REPORTS¶
Please report any problems to usd-help@eso.org. Alternatively, you may send a report to the ESO User Support Department <usd-help@eso.org>.
LICENSE¶
This file is part of the CRIRES Instrument Pipeline Copyright (C) 2002,2003 European Southern Observatory
This program is free software; you can redistribute it and/or modify it under the terms of the GNU General Public License as published by the Free Software Foundation; either version 2 of the License, or (at your option) any later version.
This program is distributed in the hope that it will be useful, but WITHOUT ANY WARRANTY; without even the implied warranty of MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the GNU General Public License for more details.
You should have received a copy of the GNU General Public License along with this program; if not, write to the Free Software Foundation, Inc., 59 Temple Place, Suite 330, Boston, MA 02111-1307 USA
2.1.0 | kmos_illumination |