.\" DO NOT MODIFY THIS FILE!  It was generated by help2man 1.49.3.
.TH FASTAQ-ENUMERATE_NAMES "1" "December 2023" "fastaq_enumerate_names 3.17.0" "User Commands"
.SH NAME
fastaq_enumerate_names \- Renames sequences in a file, calling them 1,2,3... etc
.SH DESCRIPTION
usage: fastaq_enumerate_names [options] <infile> <outfile>
.PP
Renames sequences in a file, calling them 1,2,3... etc
.SS "positional arguments:"
.TP
infile
Name of fasta/q file to be read
.TP
outfile
Name of output fasta/q file
.SS "options:"
.TP
\fB\-h\fR, \fB\-\-help\fR
show this help message and exit
.TP
\fB\-\-start_index\fR START_INDEX
Starting number [1]
.TP
\fB\-\-rename_file\fR RENAME_FILE
If used, will write a file of old name to new name
.TP
\fB\-\-keep_suffix\fR
Use this to keep a \fI\,/1\/\fP or \fI\,/2\/\fP suffix at the end of each
name
.TP
\fB\-\-suffix\fR SUFFIX
Add the given string to the end of every name