Scroll to navigation

FASTQ_QUALITY_CONVERTER(1) User Commands FASTQ_QUALITY_CONVERTER(1)

NAME

fastq_quality_converter - Converts sequences based on quality

DESCRIPTION

usage: fastq_quality_converter [-h] [-a] [-n] [-z] [-i INFILE] [-f OUTFILE] Part of FASTX Toolkit 0.0.14 by A. Gordon (assafgordon@gmail.com)

[-h]
= This helpful help screen.
[-a]
= Output ASCII quality scores (default).
[-n]
= Output numeric quality scores.
[-z]
= Compress output with GZIP.
[-i INFILE]
= FASTA/Q input file. default is STDIN.
[-o OUTFILE] = FASTA output file. default is STDOUT. [-Q N] = FASTQ ASCII offset. Default is 33.

SEE ALSO

The quality of this automatically generated manpage might be insufficient. It is suggested to visit

http://hannonlab.cshl.edu/fastx_toolkit/commandline.html

to get a better layout as well as an overview about connected FASTX tools.

September 2018 fastq_quality_converter 0.0.14