.\" -*- mode: troff; coding: utf-8 -*- .\" Automatically generated by Pod::Man 5.01 (Pod::Simple 3.43) .\" .\" Standard preamble: .\" ======================================================================== .de Sp \" Vertical space (when we can't use .PP) .if t .sp .5v .if n .sp .. .de Vb \" Begin verbatim text .ft CW .nf .ne \\$1 .. .de Ve \" End verbatim text .ft R .fi .. .\" \*(C` and \*(C' are quotes in nroff, nothing in troff, for use with C<>. .ie n \{\ . ds C` "" . ds C' "" 'br\} .el\{\ . ds C` . ds C' 'br\} .\" .\" Escape single quotes in literal strings from groff's Unicode transform. .ie \n(.g .ds Aq \(aq .el .ds Aq ' .\" .\" If the F register is >0, we'll generate index entries on stderr for .\" titles (.TH), headers (.SH), subsections (.SS), items (.Ip), and index .\" entries marked with X<> in POD. Of course, you'll have to process the .\" output yourself in some meaningful fashion. .\" .\" Avoid warning from groff about undefined register 'F'. .de IX .. .nr rF 0 .if \n(.g .if rF .nr rF 1 .if (\n(rF:(\n(.g==0)) \{\ . if \nF \{\ . de IX . tm Index:\\$1\t\\n%\t"\\$2" .. . if !\nF==2 \{\ . nr % 0 . nr F 2 . \} . \} .\} .rr rF .\" ======================================================================== .\" .IX Title "Ace::Graphics::Glyph::graded_segments 3pm" .TH Ace::Graphics::Glyph::graded_segments 3pm 2024-03-07 "perl v5.38.2" "User Contributed Perl Documentation" .\" For nroff, turn off justification. Always turn off hyphenation; it makes .\" way too many mistakes in technical documents. .if n .ad l .nh .SH NAME Ace::Graphics::Glyph::graded_segments \- The "color\-coded segments" glyph .SH SYNOPSIS .IX Header "SYNOPSIS" .Vb 1 \& See L, L and L. .Ve .SH DESCRIPTION .IX Header "DESCRIPTION" This is identical to the segments glyph, except that the intensity of each segment is proportional to the score of the segment. The maximum score is taken from the configuration variable max_score. If not provided, the maximum-scoring segment will be used. .SS OPTIONS .IX Subsection "OPTIONS" In addition to the common options, this glyph recognizes the b<\-max_score> argument. .SH BUGS .IX Header "BUGS" Although descended from the segments glyph, this glyph cannot show the orientation of the segment. .SH "SEE ALSO" .IX Header "SEE ALSO" Ace::Sequence, Ace::Sequence::Feature, Ace::Graphics::Panel, Ace::Graphics::Track, Ace::Graphics::Glyph::anchored_arrow, Ace::Graphics::Glyph::arrow, Ace::Graphics::Glyph::box, Ace::Graphics::Glyph::primers, Ace::Graphics::Glyph::segments, Ace::Graphics::Glyph::toomany, Ace::Graphics::Glyph::transcript, .SH AUTHOR .IX Header "AUTHOR" Lincoln Stein . .PP Copyright (c) 2001 Cold Spring Harbor Laboratory .PP This library is free software; you can redistribute it and/or modify it under the same terms as Perl itself. See DISCLAIMER.txt for disclaimers of warranty.