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.\" ========================================================================
.\"
.IX Title "GO::IO::go_assoc 3pm"
.TH GO::IO::go_assoc 3pm "2023-12-18" "perl v5.36.0" "User Contributed Perl Documentation"
.\" For nroff, turn off justification.  Always turn off hyphenation; it makes
.\" way too many mistakes in technical documents.
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.SH "NAME"
.Vb 1
\&  GO::IO::go_assoc \- dump GO terms as OBD XML
.Ve
.SH "SYNOPSIS"
.IX Header "SYNOPSIS"
.Vb 2
\&    my $apph = GO::AppHandle\->connect(\-d=>$go, \-dbhost=>$dbhost);
\&    my $term = $apph\->get_term({acc=>00003677});
\&
\&    #### ">\-" is STDOUT
\&    my $out = new FileHandle(">\-");
\&
\&    my $ga_out = GO::IO::go_assoc\->new(\-output=>$out);
\&    $ga_out\->write_term($term);
.Ve
.PP
\&\s-1OR:\s0
.PP
.Vb 3
\&    my $apph = GO::AppHandle\->connect(\-d=>$go, \-dbhost=>$dbhost);
\&    my $graph = $apph\->get_node_graph(\-acc=>00003677, \-depth=>2);
\&    my $out = new FileHandle(">\-");
\&
\&    my $ga_out = GO::IO::go_assoc\->new(\-output=>$out);
\&    $ga_out\->write_graph($graph);
.Ve
.SH "DESCRIPTION"
.IX Header "DESCRIPTION"
Utility class to dump \s-1GO\s0 terms as \s-1OBD XML.\s0  Currently, you just call
start_document, write_term for each term, then end_document.
.SS "new"
.IX Subsection "new"
.Vb 3
\&    Usage   \- my $ga_out = new GO::IO::go_assoc(\-output=>$out);
\&    Returns \- Output emitter.
\&    Args    \- Output FileHandle
.Ve
.PP
Initializes the writer object.  To write to standard out, do:
.PP
my \f(CW$out\fR = new FileHandle(\*(L">\-\*(R");
my \f(CW$ga_out\fR = new GO::IO::go_assoc($out);
.SS "cgi_header"
.IX Subsection "cgi_header"
.Vb 3
\&    Usage   \- $ga_out\->cgi_header;
\&    Returns \- None
\&    Args    \- None
.Ve
.PP
cgi_header prints the \*(L"Content-type: text/plain\*(R" statement.
If creating a \s-1CGI\s0 script, you should call this before further action.
.SS "write_graph"
.IX Subsection "write_graph"
.Vb 8
\&    Usage   \- $ga_out\->write_graph(\-graph=>$graph);
\&    Returns \- None
\&    Args    \-graph=>$graph,
\&            \-deep=>1 or 0,           # optional, default 0.
\&            \-qualifier=>1 or 0,      # optional, default 1.
\&            \-with=>1 or 0,           # optional, default 1.
\&            \-object_name=>1 or 0,    # optional, default 1.
\&            \-object_synonym=>1 or 0, # optional, default 1.
.Ve
.SS "write_term_list"
.IX Subsection "write_term_list"
.Vb 8
\&    Usage   \- $ga_out\->write_term_list();
\&    Returns \- None
\&    Args    \-term_listref=>$term_listref,
\&            \-deep=>1 or 0,           # optional, default 0.
\&            \-qualifier=>1 or 0,      # optional, default 1.
\&            \-with=>1 or 0,           # optional, default 1.
\&            \-object_name=>1 or 0,    # optional, default 1.
\&            \-object_synonym=>1 or 0, # optional, default 1.
.Ve
.SS "write_term"
.IX Subsection "write_term"
.Vb 8
\&    Usage   \- $ga_out\->write_term();
\&    Returns \- None
\&    Args    \-term=>$term,
\&            \-deep=>1 or 0,           # optional, default 0.
\&            \-qualifier=>1 or 0,      # optional, default 1.
\&            \-with=>1 or 0,           # optional, default 1.
\&            \-object_name=>1 or 0,    # optional, default 1.
\&            \-object_synonym=>1 or 0, # optional, default 1.
.Ve