.\" DO NOT MODIFY THIS FILE!  It was generated by help2man 1.49.3.
.TH TFF_VISUALIZE_OVERLAP.PY "1" "July 2024" "tff_visualize_overlap.py 0.3" "User Commands"
.SH NAME
tff_visualize_overlap.py \- display a tractogram and its density map
.SH DESCRIPTION
usage: tff_visualize_overlap.py [\-h] [\-\-remove_invalid]
.IP
IN_TRACTOGRAM reference
.PP
Display a tractogram and its density map (computed from Dipy) in rasmm,
voxmm and vox space with its bounding box.
.SS "positional arguments:"
.TP
IN_TRACTOGRAM
Tractogram filename. Format must be one of
trk, tck, vtk, fib, dpy, trx.
.TP
reference
Reference anatomy for tck/vtk/fib/dpy file
support (nii or nii.gz).
.SS "options:"
.TP
\fB\-h\fR, \fB\-\-help\fR
show this help message and exit
.TP
\fB\-\-remove_invalid\fR
Removes invalid streamlines to avoid the density_mapfunction to crash.