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TOAFG(1) User Commands TOAFG(1)

NAME

toAfg - Print reads stored in a file (pls|fasta|fastq) as an afg.

SYNOPSIS

toAfg input.filetype  output.filetype [-minSubreadLength l] [-regionTable regions_file] [-noSplitSubreads] [-useccsdenovo] [-uniformQV QV]

SEE ALSO

blasr(1) loadPulses(1) pls2fasta(1) samFilter(1) samtoh5(1) samtom4(1) sawriter(1) sdpMatcher(1)

July 2015 toAfg 3ca7fe8