.\" DO NOT MODIFY THIS FILE!  It was generated by help2man 1.47.13.
.TH SGA2FPS.PL "1" "March 2020" "sga2fps.pl 1.5.5" "User Commands"
.SH NAME
sga2fps.pl \- Convert SGA format into FPS format
.SH DESCRIPTION
.IP
sga2fps.pl [options] <SGA file|stdin>
.IP
where options are:
.TP
\fB\-h\fR|\-\-help
Show this stuff
.TP
\fB\-\-db\fR <path>
Use <path> to locate Chrom Id Storable File 'chro_idx.nstorage'
.TP
\fB\-f\fR <feature>
Set <feature> field
.TP
\fB\-s\fR|\-\-species <species>
Assembly <species> (i.e hg18)
.TP
\fB\-\-set0flag\fR
Set 0 flag at postion 29 of the FP line, forcing unoriented output
(default : blank)
.SH AUTHOR
 This manpage was written by Andreas Tille for the Debian distribution and
 can be used for any other usage of the program.
