positional arguments:¶

simulations

optional arguments:¶

-h, --help

show this help message and exit

-j NUM, --jobs NUM

Maximum number of simultaneous threads to run (default: number of cores, further limited by OMP_NUM_THREADS if set by the environment: 6)

--job-threads NUM

Default number of threads for one job; can be overridden by per-job with !THREADS (or !OMP_NUM_THREADS) column. Defaults to 1.

--force-threads

Force jobs to not use more cores than the maximum (see \-j), even if !THREADS colums specifies more.

--log FORMAT

Format of job log files: must contain a $, % or @, which will be replaced by script name, line number or by title column respectively. Directory for logs will be created automatically. (default: logs/$.@.log)

--global-log FILE

Filename where to redirect output of woo-batch itself (as opposed to \-\-log); if not specified (default), stdout/stderr are used

-l LIST, --lines LIST

Lines of TABLE to use, in the format 2,3-5,8,11-13 (default: all available lines in TABLE)

--results RESULTSDB

File (HDF5 or SQLite) where simulation should store its results (such as input/output files and some data); the default is to use {tableName}.hdf5 ({tableName}.sqlite under Windows), if there is a param table, otherwise each simulation defines its own default files to write results in. The preferred format is HDF5 (usually *.hdf5, *.h5, *.he5, *.hdf), SQLite is used for *.sqlite, *.db.

--nice NICE

Nice value of spawned jobs (default: 10)

--cpu-affinity

Bind each job to specific CPU cores; cores are assigned in a quasi-random order, depending on availability at the moment the jobs is started. Each job can override this setting by setting AFFINE column.

--executable FILE

Name of the program to run (default: /usr/bin/woo). Jobs can override with !EXEC column.

--rebuild

Run executable(s) with --rebuild prior to running any jobs.

--debug

Run the executable with --debug. Can be overriddenn per-job with !DEBUG column.

--gnuplot FILE

Gnuplot file where gnuplot from all jobs should be put together

--dry-run

Do not actually run (useful for getting gnuplot only, for instance)

--http-wait

Do not quit if still serving overview over http repeatedly

--exit-prompt

Do not quit until a key is pressed in the terminal (useful for reviewing plots after all simulations finish).

--plot-update TIME

Interval (in seconds) at which job plots will be updated even if not requested via HTTP. Non-positive values will make the plots not being updated and saved unless requested via HTTP (see \-\-plot-timeout for controlling maximum age of those). Plots are saved at exit under the same name as the log file, with the .log extension removed. (default: 120 seconds)

--plot-timeout TIME

Maximum age (in seconds) of plots served over HTTP; they will be updated if they are older. (default: 30 seconds)

--refresh TIME

Refresh rate of automatically reloaded web pages (summary, logs, ...).

--timing COUNT

Repeat each job COUNT times, and output a simple table with average/variance/minimum/maximum job duration; used for measuring how various parameters affect execution time. Jobs can override the global value with the !COUNT column.

--timing-output FILE

With --timing, save measured durations to FILE, instead of writing to standard output.

--randomize

Randomize job order (within constraints given by assigned cores).

--no-table

Treat all command-line argument as simulations to be run, either python scripts or saved simulations.

[--log FORMAT] [--global-log FILE] [-l LIST] [--results RESULTSDB] [--nice NICE] [--cpu-affinity] [--executable FILE] [--rebuild] [--debug] [--gnuplot FILE] [--dry-run] [--http-wait] [--exit-prompt] [--plot-update TIME] [--plot-timeout TIME] [--refresh TIME] [--timing COUNT] [--timing-output FILE] [--randomize] [--no-table] ...

woo-batch: error: unrecognized arguments: --version