table of contents
| REMOVE_SHORT_SEQS(1) | User Commands | REMOVE_SHORT_SEQS(1) |
NAME¶
remove_short_seqs - visually comparing bacterial, plasmid, chloroplast, or mitochondrial sequences
DESCRIPTION¶
usage: remove_short_seqs [[-i input] [-l length] | [-h]] -i DIRECTORY the input directory of GenBank files with .gbk extensions -l INTEGER remove GenBank files that describe sequences shorter than this length
USAGE:¶
- remove_short_seqs -i DIR -l INTEGER
DESCRIPTION:¶
- Removes GenBank files that are shorter than the specified length from the provided directory.
REQUIRED ARGUMENTS:¶
-i, --input DIR
- Input directory of GenBank files with .gbk extensions.
-l, --length INTEGER
- Remove GenBank files that describe sequences shorter than this length.
OPTIONAL ARGUMENTS:¶
-h, --help
- Show this message
EXAMPLE:¶
- remove_short_seqs -i my_project/comparison_genomes -l 100000
AUTHOR¶
This manpage was written by Andreas Tille for the Debian distribution and can be used for any other usage of the program.
| August 2018 | remove_short_seqs 20170919 |