| PRIMA(1e) | EMBOSS Manual for Debian | PRIMA(1e) |
NAME¶
prima - Selects primers for PCR and DNA amplification.
SYNOPSIS¶
prima -sequence sequence -targetrange toggle -targetstart integer -targetend integer -mintmprimer float -maxtmprimer float -minplen integer -maxplen integer -minpgccont float -maxpgccont float [-primer toggle] -minprimerlen integer -maxprimerlen integer -minpmgccont float -maxpmgccont float -overlap integer -saltconc float -dnaconc float -list boolean -outfile outfile
prima -help
DESCRIPTION¶
prima is a command line program from EMBOSS (“the European Molecular Biology Open Software Suite”). It is part of the "Nucleic:Primers" command group(s).
OPTIONS¶
Input section¶
-sequence sequence
Required section¶
Target options¶
-targetrange toggle
-targetstart integer
-targetend integer
-mintmprimer float
-maxtmprimer float
Additional section¶
Product options¶
-minplen integer
-maxplen integer
-minpgccont float
-maxpgccont float
Primer options¶
-primer toggle
-minprimerlen integer
-maxprimerlen integer
-minpmgccont float
-maxpmgccont float
Advanced section¶
-overlap integer
-saltconc float
-dnaconc float
-list boolean
Output section¶
-outfile outfile
BUGS¶
Bugs can be reported to the Debian Bug Tracking system (http://bugs.debian.org/emboss), or directly to the EMBOSS developers (http://sourceforge.net/tracker/?group_id=93650&atid=605031).
SEE ALSO¶
prima is fully documented via the tfm(1) system.
AUTHOR¶
Debian Med Packaging Team <debian-med-packaging@lists.alioth.debian.org>
COPYRIGHT¶
This manual page was autogenerated from an Ajax Control Definition of the EMBOSS package. It can be redistributed under the same terms as EMBOSS itself.
| 05/11/2012 | EMBOSS 6.4.0 |