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BP_SEQCONVERT(1p) User Contributed Perl Documentation BP_SEQCONVERT(1p)

NAME

bp_seqconvert - generic BioPerl sequence format converter

SYNOPSIS

  bp_seqconvert --from in-format --to out-format < file.in-format > file.out-format
  # or
  bp_seqconvert -f in-format -t out-format < file.in-format > file.out-format

DESCRIPTION

This script gives command line interface to BioPerl Bio::SeqIO.

SEE ALSO

Bio::SeqIO bp_sreformat.PLS for similar functionality which also supports AlignIO.

FEEDBACK

Mailing Lists

User feedback is an integral part of the evolution of this and other Bioperl modules. Send your comments and suggestions preferably to the Bioperl mailing list. Your participation is much appreciated.

  bioperl-l@bioperl.org                  - General discussion
  http://bioperl.org/wiki/Mailing_lists  - About the mailing lists

Reporting Bugs

Report bugs to the Bioperl bug tracking system to help us keep track of the bugs and their resolution. Bug reports can be submitted via the web:

  https://github.com/bioperl/bioperl-live/issues

AUTHOR - Philip Lijnzaad

Email <p.lijnzaad-at-med.uu.nl>

2020-10-28 perl v5.30.3