table of contents
AEVOL(1) | User Manual | AEVOL(1) |
/#test with man -l <file>
aevol_misc_extract -V | --version
aevol_misc_extract [-r GENER | -p POP_FILE] [-t PHEN_FILE] [-s SEQ_FILE] [-g NUM_GU] [-b]
NAME¶
aevol - an in silico experimental evolution platformSYNOPSIS¶
aevol_misc_extract -h | --helpaevol_misc_extract -V | --version
aevol_misc_extract [-r GENER | -p POP_FILE] [-t PHEN_FILE] [-s SEQ_FILE] [-g NUM_GU] [-b]
DESCRIPTION¶
Aevol is a simulation platform that allows one to let populations of digital organisms evolve in different conditions and study experimentally the mechanisms responsible for the structuration of the genome and the transcriptome.- aevol_misc_extract
- extracts the genotype and/or data about the phenotype of individuals in the provided population and write them into text files easy to parse with e.g. matlab.
OPTIONS¶
- -h, --help
- print help, then exit
- -V, --version
- print version number, then exit
-r GENER
read generation GENER from a full aevol backup
-p POP_FILE
read the population saved in population file POP_FILE
-t PHEN_FILE
extract and save some infos about the phenotypes of the individuals to file
PHEN_FILE
-s SEQ_FILE
extract and save the sequences of the individuals to file SEQ_FILE
-g num_gu
only treat this genetic unit (by default: treat all genetic units)
-b
only treat the best individual
SEE ALSO¶
ae_misc_lineage, aevol_create, aevol_modify, aevol_propagate, aevol_runJuly 2014 | aevol 4.4 |