NAME¶
fastaq_make_random_contigs - Make contigs of random sequence
DESCRIPTION¶
usage: fastaq_make_random_contigs [options] <contigs> <length>
<outfile>
Makes a multi-FASTA file of random sequences, all of the same
length. Each base has equal chance of being A,C,G or T
positional arguments:¶
- contigs
- Number of contigs to make
- length
- Length of each contig
- outfile
- Name of output file
optional arguments:¶
- -h, --help
- show this help message and exit
- --first_number FIRST_NUMBER
- If numbering the sequences, the first sequence gets this number [1]
- --name_by_letters
- Name the contigs A,B,C,... will start at A again if you get to Z
- --prefix PREFIX
- Prefix to add to start of every sequence name
- --seed SEED
- Seed for random number generator. Default is to use python's default