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PXMRCACUT(1)

User Commands

PXMRCACUT(1)

NAME¶

pxmrcacut - Extract subclade(s) from tree(s).

SYNOPSIS¶

pxmrcacut [OPTION]...

DESCRIPTION¶

Extract subclade(s) from tree(s). Takes in newick tree and MRCA file with format: MRCANAME = tip1 tip2 ...

-t, --treef=FILE: input newick tree file, stdin otherwise
-o, --outf=FILE: output newick file, stout otherwise
-m, --mrca=FILE: file containing MRCA declarations
-h, --help: display this help and exit
-V, --version: display version and exit

REPORTING BUGS¶

Report bugs to: <https://github.com/FePhyFoFum/phyx/issues> phyx home page: <https://github.com/FePhyFoFum/phyx>

AUTHOR¶

This manpage was written by Andreas Tille for the Debian distribution and can be used for any other usage of the program.

May 2018

pxmrcacut 0.99+ds