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PXRLT(1)

User Commands

PXRLT(1)

NAME¶

pxrlt - Taxon relabelling for trees.

SYNOPSIS¶

pxrlt [OPTION]...

DESCRIPTION¶

Taxon relabelling for trees. This will take nexus and newick inputs. Two ordered lists of taxa, -c (current) and -n (new) must be provided.

-t, --treef=FILE: input tree file, stdin otherwise
-c, --cnames=FILE: file containing current taxon labels (one per line)
-n, --nnames=FILE: file containing new taxon labels (one per line)
-o, --outf=FILE: output file, stout otherwise
-h, --help: display this help and exit
-V, --version: display version and exit

REPORTING BUGS¶

Report bugs to: <https://github.com/FePhyFoFum/phyx/issues> phyx home page: <https://github.com/FePhyFoFum/phyx>

AUTHOR¶

This manpage was written by Andreas Tille for the Debian distribution and can be used for any other usage of the program.

May 2018

pxrlt 0.99+ds