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PXRR(1)

User Commands

PXRR(1)

NAME¶

pxrr - This will reroot (or unroot) a tree file and produce a newick.

SYNOPSIS¶

pxrr [OPTION]... [FILE]...

DESCRIPTION¶

This will reroot (or unroot) a tree file and produce a newick. Can read from stdin or file.

-t, --treef=FILE: input tree file, stdin otherwise
-g, --outgroups=CSL: outgroup sep by commas (NO SPACES!)
-u, --unroot: unroot the tree
-o, --outf=FILE: output tree file, stout otherwise
-s, --silent: do not error if outgroup(s) not found
-h, --help: display this help and exit
-V, --version: display version and exit

REPORTING BUGS¶

Report bugs to: <https://github.com/FePhyFoFum/phyx/issues> phyx home page: <https://github.com/FePhyFoFum/phyx>

AUTHOR¶

This manpage was written by Andreas Tille for the Debian distribution and can be used for any other usage of the program.

May 2018

pxrr 0.99+ds