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RNR-LSI(1) User Commands RNR-LSI(1)

NAME

rnr-lsi - computes three flavors of leaf stability index for each taxon

SYNOPSIS

rnr-lsi -i <bootTrees> -n <runId> [-w <workingDir>] [-h]

OPTIONS

OBLIGATORY

-i <bootTrees>
A collection of bootstrap trees.
-n <runId>
An identifier for this run.

OPTIONAL

-x <excludeFile>
Prune the taxa in the file first (one taxon per line), before computing the lsi.
-w <workDir>
A working directory where output files are created.
-h
This help file.

AUTHOR

This manpage was written by Andreas Tille for the Debian distribution and can be used for any other usage of the program.
March 2017 rnr-lsi 1.0