| GMX-WHEEL(1) | GROMACS | GMX-WHEEL(1) |
NAME¶
gmx-wheel - Plot helical wheels
SYNOPSIS¶
gmx wheel [-f [<.dat>]] [-o [<.eps>]] [-r0 <int>] [-rot0 <real>]
[-T <string>] [-[no]nn]
DESCRIPTION¶
gmx wheel plots a helical wheel representation of your sequence. The input sequence is in the .dat file where the first line contains the number of residues and each consecutive line contains a residue name.
OPTIONS¶
Options to specify input files:
- -f [<.dat>] (nnnice.dat)
- Generic data file
Options to specify output files:
- -o [<.eps>] (plot.eps)
- Encapsulated PostScript (tm) file
Other options:
- -r0 <int> (1)
- The first residue number in the sequence
- -rot0 <real> (0)
- Rotate around an angle initially (90 degrees makes sense)
- -T <string>
- Plot a title in the center of the wheel (must be shorter than 10 characters, or it will overwrite the wheel)
- -[no]nn (yes)
- Toggle numbers
SEE ALSO¶
gmx(1)
More information about GROMACS is available at <http://www.gromacs.org/>.
COPYRIGHT¶
2024, GROMACS development team
| January 30, 2024 | 2024 |