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GMX-WHEEL(1) GROMACS GMX-WHEEL(1)

NAME

gmx-wheel - Plot helical wheels

SYNOPSIS

gmx wheel [-f [<.dat>]] [-o [<.eps>]] [-r0 <int>] [-rot0 <real>]


          [-T <string>] [-[no]nn]


DESCRIPTION

gmx wheel plots a helical wheel representation of your sequence. The input sequence is in the .dat file where the first line contains the number of residues and each consecutive line contains a residue name.

OPTIONS

Options to specify input files:

Generic data file

Options to specify output files:

Encapsulated PostScript (tm) file

Other options:

The first residue number in the sequence
Rotate around an angle initially (90 degrees makes sense)
Plot a title in the center of the wheel (must be shorter than 10 characters, or it will overwrite the wheel)
-[no]nn (yes)
Toggle numbers

SEE ALSO

gmx(1)

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2024, GROMACS development team

October 31, 2024 2024.4