NAME¶

cif_values - read CIFs and print out requested tag values in a tabular form.

SYNOPSIS¶

cif_values --options input1.cif input*.cif

DESCRIPTION¶

Read CIFs and print out requested tag values in a tabular form.

OPTIONS¶

-t, --tags _tag1,_tag2,_tag3

--tags "_tag1 _tag2 _tag3"
Print out values of tags _tag1, _tag2, and _tag3;
the specified tag list becomes a new list of printed tags.

-a, --add-tag _tag4
Add tag _tag4 to the list of printed tags.

-c, --clear-tags
Clear the list of printed tags accumulated so far.

-h, --header
Print out header with the names of selected tags at the
beginning (default).

-h-, --no-header
Do not print out any header.

-r, --replace-spaces
Replace spaces into underscores (default).

-r-, --dont-replace-spaces, --no-replace-spaces
Do not replace spaces into underscores (works
satisfactory only when tabs are used as separators).

-s, --separator=", "
Use the specified string as a separator between tag
values on a line.

-u, --uniquify-tags _tag1,_tag2
Print only unique values of specified tags, not the whole
list of values.

--add-uniquified-tag _tag1
Add tag '_tag' to the uniquified tag list.

-u-, --dont-uniquify-tags, --no-uniquify-tags
Print all values of all tags, do not uniquify any tags
(default).

--tab-separator
Use TAB character as a separator between tag values on
a line (default).

--vseparator, --value-separator ','
Use the specified string to separate multiple values
of a given tag (default: ',').

--treat-dots-as-underscores
Convert all dots in tag names into underscores (default).

--dont-treat-dots-as-underscores, --no-treat-dots-as-underscores
Leave original tags as they are.

--filename
Print out full filename at the beginning of each line.

--fix-syntax-errors
Try to fix those syntax errors in input CIFs that can be
corrected unambiguously.

--no-fix-syntax-errors,

--dont-fix-syntax-errors
Do not try to fix syntax errors in input CIFs (default).

--basename
Print out basename of each file at the beginning of each
line.

--no-filename
Do not print file names (default).

--dataname
Print out data block name at the beginning of each line
(default).

--no-dataname
Do not print data block names.

--use-perl-parser

--use-c-parser
Specify parser to parse CIF files (default: C parser).

--help, --usage
Output a short usage message (this message) and exit.

--version
Output version information and exit.

REPORTING BUGS¶

Report cif_values bugs using e-mail: cod-bugs@ibt.lt