NAME¶

cod2rdf - describe (in RDF format) properties of COD structures.

SYNOPSIS¶

cod2rdf --options 1000000 "[1-9][0-9]6"

DESCRIPTION¶

Describe (in RDF format) properties of COD structures.

OPTIONS¶

-d, --database cod
Use database "cod" to query for structures.

-h, --host www.crystallography.net

-s, --server www.crystallography.net
Query COD database on the host 'www.crystallography.net'.

-l, --localhost
Use database server on the localhost to query the
COD database.

-p, --port 3306
Use the specified port to query structures
(default: 3306).

--platform mysql
Use specified SQL platform (default: 'mysql').

-u, --user cod_reader
Use user name "cod_reader" to access the COD database.
This user should have at least the SELECT privilege,
i.e. should be able to read the COD database, without
supplying a password.

--password
Use the specified password to connect (default: '').

--vocabulary-namespace cod
Use vocabulary namespace "cod" to prefix properties
native to the queried database.

--vocabulary-url-prefix http://www.crystallography.net/cod/doc/rdf/
Specify URL prefix for database's native namespace.

--prefix, --db-url-prefix http://www.crystallography.net/cod/
Specify URL prefix for all objects in the queried
database.

--postfix, --db-url-postfix .html
Specify URL postfix for all objects in the queried
database.

--def-table, --definition-table databases
Look "databases" table for descriptions of remote
databases.

--db-name, --database-name cod
Use "cod" as the abbreviation of queried databases.
This abbreviation is used in construction of
cross-referencing table names, i.e. "pubchem_x_cod".

--from
Generate RDFs for all database entries starting at
specified entry and ending at either the entry
specified using '--to' command line option or the
last entry in the database.

--to
Generate RDFs for all database entries from either the
entry specified using '--from' command line option or
the first entry in the database.

--range
Generate RDFs for all database entries in the specified
range. Range should be specified in the form 'X-Y', where
X is the first and Y is the last entry.

--revision
Generate RDFs for all database entries deposited in the
specified or older Subversion revision of the database.

--split-author-names
Split author names in internal database representation
at semicolons (';') to produce RDF-parsable list of
author names. Each author in such list is marked with
"author" property instead of "authors", which is used
for non-split value (default).

--no-split-author-names, --dont-split-author-names
Make no assumptions about internal database
representation of author list.

--xml-output
Output RDF in XML carrier format (default).

--n3-output
Output RDF in N3 (Notation3) carrier format.

--turtle-output
Output RDF in Turtle carrier format.

--ntriples-output, --n-triples-output
Output RDF in N-Triples carrier format.

--replace-utf-codepoints-from
Replace Unicode code points starting at specified point
with carrier format-specific entities.

--no-replace-utf-codepoints, --dont-replace-utf-code-points
Leave Unicode code points unescaped (default).

--html-utf-escapes
Escape Unicode code points using HTML hexadecimal format
corresponding to '&#x%04X;' formatted string (default).

--internal-utf-escapes
Escape Unicode code points using internal format
corresponding to '\u%04X' formatted string.

--utf-escape-format
Escape Unicode code points using format corresponding
to the provided formatted string.

--help, --usage
Output a short usage message (this message) and exit.

--version
Output version information and exit.

REPORTING BUGS¶

Report cod2rdf bugs using e-mail: cod-bugs@ibt.lt