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EDAMHASINPUT(1e) EMBOSS Manual for Debian EDAMHASINPUT(1e)

NAME

edamhasinput - Find EDAM ontology terms by has_input relation

SYNOPSIS

edamhasinput -identifier string [-namespace list] -sensitive boolean -subclasses boolean -obsolete boolean -edamhasinput outobo

edamhasinput -help

DESCRIPTION

edamhasinput is a command line program from EMBOSS (“the European Molecular Biology Open Software Suite”). It is part of the "Ontology:EDAM,Data retrieval:Ontology data" command group(s).

OPTIONS

Input section

-identifier string

Additional section

-namespace list

By default all terms are returned. Searches can be limited to one or a few namespaces. Default value: *

Advanced section

-sensitive boolean

By default, the query keywords are matched against the EDAM term names (and synonyms) only. This option also matches the keywords against the EDAM term definitions and will therefore (typically) report more matches. Default value: N

-subclasses boolean

Extend the query matches to include all terms which are specialisations (EDAM sub-classes) of the matched type. Default value: N

-obsolete boolean

The default behaviour is to not use or return obsolete terms. This option if set will include all terms. Default value: N

Output section

-edamhasinput outobo

BUGS

Bugs can be reported to the Debian Bug Tracking system (http://bugs.debian.org/emboss), or directly to the EMBOSS developers (http://sourceforge.net/tracker/?group_id=93650&atid=605031).

SEE ALSO

edamhasinput is fully documented via the tfm(1) system.

AUTHOR

Debian Med Packaging Team <debian-med-packaging@lists.alioth.debian.org>

Wrote the script used to autogenerate this manual page.

COPYRIGHT

This manual page was autogenerated from an Ajax Control Definition of the EMBOSS package. It can be redistributed under the same terms as EMBOSS itself.

05/11/2012 EMBOSS 6.4.0