table of contents
| FASTAQ-CAF_TO_FASTQ(1) | User Commands | FASTAQ-CAF_TO_FASTQ(1) |
NAME¶
fastaq_caf_to_fastq - Converts a CAF file to FASTQ format
DESCRIPTION¶
usage: fastaq_caf_to_fastq [options] <infile> <outfile>
Converts CAF file to FASTQ format
positional arguments:¶
optional arguments:¶
- -h, --help
- show this help message and exit
- -c, --clip
- Use clipping info to clip reads, if present in the input CAF file (as lines of the form "Clipping QUAL start end"). Default is to not clip
- -l INT, --min_length INT
- Minimum length of sequence to output [1]
| September 2021 | fastaq_caf_to_fastq 3.17.0 |