NAME¶

ffindex_from_fasta - populate index from FASTA file

DESCRIPTION¶

USAGE: ffindex_from_fasta -v | [-s] data_filename index_filename fasta_filename

-s

sort index file

-i

use identifier as name (you probably want -s too)

-n

use incremental number as id (default)

-v

print version

ENVIRONMENT

FFINDEX_MAX_INDEX_ENTRIES - allocate memory for this number of entries

Designed and implemented by Andreas Hauser <andy@splashground.de>.

BUGS¶

User feedback is welcome, especially bugs, performance issues and last but not least convenience of the programs and API.

Email Andreas Hauser hauser@genzentrum.lmu.de.