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GT-MKFEATUREINDEX(1) GenomeTools Manual GT-MKFEATUREINDEX(1)

NAME

gt-mkfeatureindex - Creates a new FeatureIndex from annotation data.

SYNOPSIS

gt mkfeatureindex [option ...] <input filename(s)>

DESCRIPTION

-force [yes|no]

force writing to output file (default: no)

-backend [...]

database backend to use choose from [sqlite] (default: sqlite)

-input [...]

input data format choose from gff|bed|gtf (default: gff)

-filename [string]

filename for feature database (sqlite backend only) (default: undefined)

-v [yes|no]

be verbose (default: no)

-help

display help and exit

-version

display version information and exit

REPORTING BUGS

Report bugs to https://github.com/genometools/genometools/issues.

04/27/2024 GenomeTools 1.6.5