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GT-SEQTRANSFORM(1) GenomeTools Manual GT-SEQTRANSFORM(1)

NAME

gt-seqtransform - Perform simple transformations on the given sequence file(s).

SYNOPSIS

gt seqtransform [option ...] [sequence_file ...]

DESCRIPTION

-addstopaminos [yes|no]

append stop amino acids (*) to given protein sequences, if not already present (default: no)

-width [value]

set output width for FASTA sequence printing (0 disables formatting) (default: 0)

-o [filename]

redirect output to specified file (default: undefined)

-gzip [yes|no]

write gzip compressed output file (default: no)

-bzip2 [yes|no]

write bzip2 compressed output file (default: no)

-force [yes|no]

force writing to output file (default: no)

-help

display help and exit

-version

display version information and exit

REPORTING BUGS

Report bugs to https://github.com/genometools/genometools/issues.

04/27/2024 GenomeTools 1.6.5