table of contents
GO::Model::GeneProduct(3pm) | User Contributed Perl Documentation | GO::Model::GeneProduct(3pm) |
NAME¶
GO::Model::GeneProduct - gene product in a particular species
DESCRIPTION¶
represents a gene product in a particular species (this will effectively always be referred to implicitly by the gene symbol even though a gene may have >1 product)
acc¶
Usage - Returns - Args -
symbol¶
Usage - Returns - Args -
type¶
Usage - Returns - Args -
full_name¶
Usage - Returns - Args -
as_str¶
Usage - Returns - Args -
add_synonym¶
synonym_list¶
accessor: gets/set list of synonyms [array reference]
speciesdb¶
Usage - Returns - Args -
add_seq¶
Usage - Returns - Args - GO::Model::Seq
seq_list¶
Usage - Returns - GO::Model::Seq listref Args -
seq¶
Usage - Returns - GO::Model::Seq Args -
returns representative sequence object for this product
properties¶
Usage - Returns - hashref Args - hashref
set_property¶
Usage - $sf->set_property("wibble", "on"); Returns - Args - property key, property scalar
note: the property is assumed to be multivalued, therefore
$sf->set_property($k,
$scalar) will add to the array, and
$sf->set_property($k,
$arrayref) will set the array
get_property¶
Usage - Returns - first element of the property Args - property key
get_property_list¶
Usage - Returns - the property arrayref Args - property key
to_fasta¶
Usage - Returns - Args -
returns the longest seq by default
2023-12-18 | perl v5.36.0 |