| RG::Utils::Copf(3pm) | User Contributed Perl Documentation | RG::Utils::Copf(3pm) |
NAME¶
RG::Utils::Copf - Rost Lab perl utilities
SYNOPSIS¶
use RG::Utils::Copf;
FUNCTIONS¶
See module source for description.
- amino_acid_convert_3_to_1
- amino_acid_convert_3_to_1_ini
- brIniErr
- brIniGetArg
- brIniHelp
- brIniHelpLoop
- brIniHelpRdItself
- brIniRdDef
- brIniSet
- brIniWrt
- bynumber
- bynumber_high2low
- cleanUp
- complete_dir
- completeDir
- convAliGen
- convDsspGen
- convFastamul2many
- convFssp2Daf
- convFsspGen
- convGcg2fasta
- convHssp2seq
- convHsspGen
- convMsf2saf
- convPdb2seq
- convPdbGen
- convPhd2dssp
- convPhd2seq
- convPhdGen
- convPir2fasta
- convPirmulGen
- convSaf2many
- convSeq2fastaPerl
- convSeq2seq
- convSeq2seqOld
- convSeqGen
- convSwiss2fasta
- copf
- dsspGetChain
- dsspRdSeq
- dsspWrtFromPhd
- errSbr
- errSbrMsg
- fastaRdGuide
- fastaRdMul
- fastaWrt
- fastaWrtMul
- fctRunTimeLeft
- fctSeconds2time
- gcgRd
- gcgWrt
- getDistanceNewCurveIde
- getFileFormatQuick
- get_in_keyboard
- get_range
- get_rangeHyphen
- getSysARCH
- hsspCorrectNali
- hsspGetChain
- hsspGetChainLength
- hsspRdAli
- hsspRdHeader
- hsspRdSeqSecAccOneLine
- ini
- iniDef
- iniHelpLoc
- is_chain
- isDaf
- is_dssp
- isFasta
- isFastaMul
- is_fssp
- isGcg
- is_hssp
- isMsf
- isPdb
- is_pdbid
- isPhdAcc
- isPhdBoth
- isPhdHtm
- isPhdSec
- isPir
- isPirMul
- is_ppcol
- isRdb
- is_rdb_htmref
- is_rdb_htmtop
- is_rdb_nnDb
- isSaf
- is_strip
- isSwiss
- msfBlowUp
- msfCheckFormat
- msfCompress
- msfCountNali
- msfRd
- msfShorten
- msfWrt
- open_file
- pdbExtrSequence
- pirRdMul
- pirWrtMul
- pirWrtOne
- rdRdbAssociative
- rdRdbAssociativeNum
- safCompress
- safRd
- safWrt
- seqGenWrt
- swissRdSeq
- sysDate
- sysGetUserLoc
- sysRunProg
- wrtLoc
VARIABLES¶
AUTHOR¶
B. Rost <rost@rostlab.org> L. Kajan <lkajan@rostlab.org>
SEE ALSO¶
| 2022-01-19 | perl v5.32.1 |