NAME¶

prokka-hamap_to_hmm - rapid annotation of prokaryotic genomes

SYNOPSIS¶

prokka-hamap_to_hmm [options] [--datadir hamap_data_subdir] > hamap.hmm

DESCRIPTION¶

--help

This help.

--verbose!

Verbose progress (default '0').

--datadir=s

Path to downloaded HAMAP folder (ftp://ftp.expasy.org/databases/hamap/) (default '').

--sep=s

Separator between EC/gene/product (default '~~~').

--blank=s

Replace empty EC/gene/product with this (default '').