NAME¶

CAI - calculate codon adaptation index for a DNA sequence

SYNOPSIS¶

CAI [OPTIONS]

OPTIONS¶

-s, --sequence FILE

The sequence to calculate the CAI for. [required]

-r, --reference FILE

The reference sequences to calculate CAI against. [required]

-g, --genetic-code INTEGER

The genetic code to use. Defaults to 11.

--help

Show this message and exit.