NAME¶

quorum_create_database - create database of k-mers for quorum error corrector

SYNOPSIS¶

create_database_cmdline [options] reads:path+

DESCRIPTION¶

Create database of k-mers for quorum error corrector

Create k-mer database for quorum_error_correct

OPTIONS¶

default value in (), *required:

-s, --size=uint64

*Initial hash size

-m, --mer=uint32

*Mer length

-b, --bits=uint32

*Bits for value field

-q, --min-qual-value=uint32

Min quality as an int

-Q, --min-qual-char=string

Min quality as a ASCII character

-t, --threads=uint32

Number of threads (1)

-o, --output=path

Output file (combined_database)

-p, --reprobe=int32

Maximum number of reprobes (126)

-U, --usage

Usage

-h, --help

This message

-V, --version

Version

AUTHOR¶

This manpage was written by Andreas Tille for the Debian distribution and can be used for any other usage of the program.