table of contents
| COLLAPSE_PARTIALS(1) | User Commands | COLLAPSE_PARTIALS(1) |
NAME¶
collapse_partials - Collection of tools to annotate genomes using long read transcriptomics data
DESCRIPTION¶
Usage of collapse_partials:¶
- -M
- Discard monoexonic transcripts.
- -U
- Discard transcripts which are not oriented.
- -V
- Print out version.
-d int
- Internal exon boundary tolerance. (default 5)
-e int
- Three prime exons boundary tolerance. (default 30)
-f int
- Five prime exons boundary tolerance. (default 5000)
- -h
- Print out help message.
-prof string
- Write out CPU profiling information.
-t int
- Number of cores to use. (default 4)
AUTHOR¶
This manpage was written by Nilesh Patra for the Debian
distribution and
can be used for any other usage of the program.
| September 2020 | collapse_partials 0.1.0+ds |