table of contents
| SPLICED_BAM2GFF(1) | User Commands | SPLICED_BAM2GFF(1) |
NAME¶
spliced_bam2gff - Collection of tools to annotate genomes using long read transcriptomics data
DESCRIPTION¶
Usage of spliced_bam2gff:¶
- -M
- Input is from minimap2.
- -V
- Print out version.
- -g
- Use strand tag as feature orientation then read strand if not available.
- -h
- Print out help message.
- -s
- Use read strand (from BAM flag) as feature orientation.
-t int
- Number of cores to use. (default 4)
AUTHOR¶
This manpage was written by Nilesh Patra for the Debian
distribution and
can be used for any other usage of the program.
| September 2020 | spliced_bam2gff 0.1.0+ds |