NAME¶

barrnap - Predict location of ribosomal RNA genes in genomes

DESCRIPTION¶

OPTIONS¶

--help

This help

--version

Print version and exit

--citation

Print citation for referencing barrnap

--kingdom [X]

Kingdom: arc bac euk mito (default 'bac')

--quiet

No screen output (default OFF)

--threads [N]

Number of threads/cores/CPUs to use (default '1')

--lencutoff [n.n] Proportional length threshold to label as partial (default '0.8')

--reject [n.n]

Proportional length threshold to reject prediction (default '0.25')

--evalue [n.n]

Similarity e-value cut-off (default '1e-06')

--incseq

Include FASTA _input_ sequences in GFF3 output (default OFF)

--outseq [X]

Save rRNA hit seqs to this FASTA file (default '')