table of contents
datalad add-archive-content(1) | General Commands Manual | datalad add-archive-content(1) |
NAME¶
datalad add-archive-content - add content of an archive under git annex control.
SYNOPSIS¶
datalad add-archive-content [-h] [-d DATASET] [--annex ANNEX] [--add-archive-leading-dir] [--strip-leading-dirs] [--leading-dirs-depth LEADING_DIRS_DEPTH] [--leading-dirs-consider LEADING_DIRS_CONSIDER] [--use-current-dir] [-D] [--key] [-e EXCLUDE] [-r RENAME] [--existing {fail,overwrite,archive-suffix,numeric-suffix}] [-o ANNEX_OPTIONS] [--copy] [--no-commit] [--allow-dirty] [--stats STATS] [--drop-after] [--delete-after] [--version] archive
DESCRIPTION¶
Given an already annex'ed archive, extract and add its files to the dataset, and reference the original archive as a custom special remote.
Examples¶
Add files from the archive 'big_tarball.tar.gz', but keep big_tarball.tar.gz in the index::
% datalad add-archive-content big_tarball.tar.gz
Add files from the archive 'tarball.tar.gz', and remove big_tarball.tar.gz from the index::
% datalad add-archive-content big_tarball.tar.gz --delete
Add files from the archive 's3.zip' but remove the leading directory::
% datalad add-archive-content s3.zip --strip-leading-dirs
OPTIONS¶
- archive
- archive file or a key (if --key specified). Constraints: value must be a string
- -h, --help, --help-np
- show this help message. --help-np forcefully disables the use of a pager for displaying the help message
- -d DATASET, --dataset DATASET
- "specify the dataset to save. Constraints: Value must be a Dataset or a valid identifier of a Dataset (e.g. a path) or value must be NONE
- --annex ANNEX
- DEPRECATED. Use the 'dataset' parameter instead.
- --add-archive-leading-dir
- place extracted content under a directory which would correspond to the archive name with all suffixes stripped. E.g. the content of `archive.tar.gz` will be extracted under `archive/`.
- --strip-leading-dirs
- remove one or more leading directories from the archive layout on extraction.
- --leading-dirs-depth LEADING_DIRS_DEPTH
- maximum depth of leading directories to strip. If not specified (None), no limit.
- --leading-dirs-consider LEADING_DIRS_CONSIDER
- regular expression(s) for directories to consider to strip away. Constraints: value must be a string or value must be NONE
- --use-current-dir
- extract the archive under the current directory, not the directory where the archive is located. This parameter is applied automatically if --key was used.
- -D, --delete
- delete original archive from the filesystem/Git in current tree. Note that it will be of no effect if --key is given.
- --key
- signal if provided archive is not actually a filename on its own but an annex key. The archive will be extracted in the current directory.
- -e EXCLUDE, --exclude EXCLUDE
- regular expressions for filenames which to exclude from being added to annex. Applied after --rename if that one is specified. For exact matching, use anchoring. Constraints: value must be a string or value must be NONE
- -r RENAME, --rename RENAME
- regular expressions to rename files before added them under to Git. The first defines how to split provided string into two parts: Python regular expression (with groups), and replacement string. Constraints: value must be a string or value must be NONE
- --existing {fail, overwrite, archive-suffix, numeric-suffix}
- what operation to perform if a file from an archive tries to overwrite an existing file with the same name. 'fail' (default) leads to an error result, 'overwrite' silently replaces existing file, 'archive-suffix' instructs to add a suffix (prefixed with a '-') matching archive name from which file gets extracted, and if that one is present as well, 'numeric-suffix' is in effect in addition, when incremental numeric suffix (prefixed with a '.') is added until no name collision is longer detected. [Default: 'fail']
- -o ANNEX_OPTIONS, --annex-options ANNEX_OPTIONS
- additional options to pass to git-annex. Constraints: value must be a string or value must be NONE
- --copy
- copy the content of the archive instead of moving.
- --no-commit
- don't commit upon completion.
- --allow-dirty
- flag that operating on a dirty repository (uncommitted or untracked content) is ok.
- --stats STATS
- ActivityStats instance for global tracking.
- --drop-after
- drop extracted files after adding to annex.
- --delete-after
- extract under a temporary directory, git-annex add, and delete afterwards. To be used to "index" files within annex without actually creating corresponding files under git. Note that `annex dropunused` would later remove that load.
- --version
- show the module and its version which provides the command
AUTHORS¶
datalad is developed by The DataLad Team and Contributors <team@datalad.org>.
2024-11-18 | datalad add-archive-content 1.1.4 |