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TRANSFORMIX(1) User Commands TRANSFORMIX(1)

NAME

transformix - apply geometric transform to an image

SYNOPSIS

transformix mandatory-args [optional-args]

DESCRIPTION

transformix applies a transform on an input image and/or generates a deformation field. The transform is specified in the transform-parameter file.

OPTIONS

Call transformix from the command line with mandatory arguments:

Optional extra commands:

the point are transformed according to the specified transform-parameter file use "-def all" to transform all points from the input-image, which effectively generates a deformation field.
At least one of the options "-in", "-def", "-jac", or "-jacmat" should be given.

The transform-parameter file must contain all the information necessary for transformix to run properly. That includes which transform to use, with which parameters, etc. For a usable transform-parameter file, see the output of elastix.

SEE ALSO

elastix(1)

Check the website http://elastix.isi.uu.nl, or mail elastix.support@gmail.com.

December 2010 transformix version: 4.400