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DBXOBO(1e) EMBOSS Manual for Debian DBXOBO(1e)

NAME

dbxobo - Index an obo ontology using b+tree indices

SYNOPSIS

dbxobo -dbname string -standardname string -dbresource string -directory directory -filenames string -fields list -compressed boolean -release string -date string -exclude string -indexoutdir outdir -outfile outfile

dbxobo -help

DESCRIPTION

dbxobo is a command line program from EMBOSS (“the European Molecular Biology Open Software Suite”). It is part of the "Utils:Database indexing" command group(s).

OPTIONS

Input section

-dbname string

-standardname string

Default value: $(dbname)

-dbresource string

Default value: oboresource

-directory directory

Default value: .

-filenames string

Default value: *.obo

Required section

-fields list

Default value: *

-compressed boolean

Default value: Y

Advanced section

-release string

Default value: 0.0

-date string

Default value: 00/00/00

-exclude string

Output section

-indexoutdir outdir

Default value: .

-outfile outfile

BUGS

Bugs can be reported to the Debian Bug Tracking system (http://bugs.debian.org/emboss), or directly to the EMBOSS developers (http://sourceforge.net/tracker/?group_id=93650&atid=605031).

SEE ALSO

dbxobo is fully documented via the tfm(1) system.

AUTHOR

Debian Med Packaging Team <debian-med-packaging@lists.alioth.debian.org>

Wrote the script used to autogenerate this manual page.

COPYRIGHT

This manual page was autogenerated from an Ajax Control Definition of the EMBOSS package. It can be redistributed under the same terms as EMBOSS itself.

05/11/2012 EMBOSS 6.4.0