table of contents
| TFBS::Word(3pm) | User Contributed Perl Documentation | TFBS::Word(3pm) |
NAME¶
TFBS::Word - base class for word-based patterns
DESCRIPTION¶
TFBS::Word is a base class consisting of universal constructor called by its subclasses (TFBS::Matrix::*), and word pattern manipulation methods that are independent of the word type. It is not meant to be instantiated itself.
FEEDBACK¶
Please send bug reports and other comments to the author.
AUTHOR - Boris Lenhard¶
Boris Lenhard <Boris.Lenhard@cgb.ki.se>
APPENDIX¶
The rest of the documentation details each of the object methods. Internal methods are preceded with an underscore.
new¶
word¶
validate_word¶
Required in all subclasses
length¶
search_seq¶
search_aln¶
| 2024-10-15 | perl v5.40.0 |