NAME¶

vcfgenosummarize

SYNOPSIS¶

vcfgenosummarize <[input file] >[output vcf]

DESCRIPTION¶

Adds summary statistics to each record summarizing qualities reported in called genotypes. Uses: RO (reference observation count), QR (quality sum reference observations) AO (alternate observation count), QA (quality sum alternate observations)

OPTIONS¶

Type: statistics
    

EXIT VALUES¶

0

Success

not 0

Failure

SEE ALSO¶

vcflib(1)

OTHER¶

LICENSE¶

Copyright 2011-2024 (C) Erik Garrison and vcflib contributors. MIT licensed. Copyright 2020-2024 (C) Pjotr Prins.

AUTHORS¶

Erik Garrison and vcflib contributors.