table of contents
FREE_BIFT(1) | User Commands | FREE_BIFT(1) |
NAME¶
free_bift - manual page for free_bift 2024.9.0
DESCRIPTION¶
usage: free_bift [OPTIONS] FILES
Calculate the density as function of distance p(r) curve from an I(q) scattering curve
positional arguments:¶
- FILE
- I(q) files to convert into p(r)
options:¶
- -h, --help
- show this help message and exit
- -v, --verbose
- switch to verbose mode
- -V, --version
- show program's version number and exit
- -o OUTPUT, --output OUTPUT
- Output filename
- -u {nm,??,A}, --unit {nm,??,A}
- Unit for q: inverse nm or ??ngstrom?
- -n NPT, --npt NPT
- number of points in p(r) curve
- -s SCAN, --scan SCAN
- Initial alpha-scan size to guess the start parameter
- -m MC, --mc MC
- Number of Monte-Carlo samples in post-refinement
- -t THRESHOLD, --threshold THRESHOLD
- Sample at average ?? threshold*sigma in MC
free_bift is a Python implementation of the Bayesian Inverse Fourier Transform This code is the implementation of Steen Hansen J. Appl. Cryst. (2000). 33, 1415-1421 Based on the BIFT from Jesse Hopkins, available at: https://sourceforge.net/p/bioxtasraw/git/ci/master/tree/bioxtasraw/BIFT.py It aims at being a drop in replacement for datgnom of the ATSAS suite.
SEE ALSO¶
The full documentation for free_bift is maintained as a Texinfo manual. If the info and free_bift programs are properly installed at your site, the command
- info free_bift
should give you access to the complete manual.
September 2024 | free_bift 2024.9.0 |