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REAPR-SEQRENAME(1)   REAPR-SEQRENAME(1)

NAME

reapr-seqrename - renames all sequences in a BAM file

SYNOPSIS

reapr seqrename <renamefile> <in.bam> <out.bam>

DESCRIPTION

<renamefile> is the file .info made by facheck, which contains the mapping of old name to new name.

SEE ALSO

reapr(1)