table of contents
| dendropy-format(1) | User Commands | dendropy-format(1) |
NAME¶
dendropy-format - convert files from one format to another
DESCRIPTION¶
usage: dendropy-format --from [FORMAT] --to [FORMAT] [OPTIONS] <SOURCE-FILE> > DEST-FILE
options:¶
- -h, --help
- show this help message and exit
Source:¶
- source_file
- Path to source data.
- -f FORMAT, --from FORMAT
- Format of data source.
- -d {dna,rna,standard}, --data-type {dna,rna,standard}
- Type of data
Destination:¶
- -t FORMAT, --to FORMAT
- Format of data source.
- -u, --unquoted-underscores
- [NEXUS/Newick:] Do not quote labels with undescores.
- --recode-uncertain {missing,gap}
- Recode ambiguous or uncertain characters as missing ('?') or gaps ('-')
| December 2024 | usage: dendropy-format --from [FORMAT] --to [FORMAT] [OPTIONS] <SOURCE-FILE> > DEST-FILE |