NAME¶
vbbatch - run a command line multiple times with variable substitution
SYNOPSIS¶
vbbatch <flag> ...
DESCRIPTION¶
vbbatch is part of the VoxBo suite of tools for brain image analysis.
vbbatch allows you to run a command multiple times with some variable
substitutions (typically replacing the token FILE with each of a set of
filenames). The commands are then run in parallel. If a VoxBo cluster is
detected, the jobs will be submitted to the cluster.
OPTIONS¶
EXAMPLES¶
To run myscript.sh on all your subjects' Anatomy directories:
-
- vbbatch -c "myscript.sh FILE" study*/sub*/Anatomy
-r
To run myperms.sh 1000 times at low priority, with different output files:
-
- vbbatch -c "myperms.sh results_IND.nii.gz" -d
1000 -r -p xnice
AVAILABILITY¶
Pre-built VoxBo binaries are available for Linux, OSX, and Cygwin, and via the
NeuroDebian project (neuro.debian.net) for Debian derivatives.
CAVEATS¶
VoxBo is provided with no warranty whatsoever.
AUTHOR¶
For an historical roster of the VoxBo development team, visit www.voxbo.org.
SEE ALSO¶
For detailed help on any VoxBo command-line program, run it with no arguments.
For graphical programs, use the -h flag. For more help with VoxBo, for
information about the mailing list, or to report bugs, visit the web site at
www.voxbo.org.
For information about file format support in VoxBo, see
voxbo-fileformats(7). For general information about VoxBo, see
voxbo(7).
